I’ve just taken a look at your log. I saw that the following lines appear:
- So I’m not sure if you have two versions of BioDynaMo installed, but for instance your compiler complains about
L2F which is a feature in the latest master and is not there in v1.0.8. I’d recommend to get rid of the multiple repositories first if you don’t have any strong reasons for having it. Make sure that the one that you want to use is up to date with the latest master, e.g.
rm -rf /home/ummagumma/biodynamo-v1.0.8
git checkout master
- If I was in your position I’d rebuild BioDynaMo to be on the safe side. (N = number of available processes)
make cleanbuild (or ninja cleanbuild)
make -j N
- make sure you source biodynamo, do this any time you start a new terminal as well
Verify that biodynamo has been installed properly by running the
biodynamo/build/bin. There should be no errors.
Once you’ve tried those steps, try to again run the cell devision.
biodynamo demo cell_division
Hope that help, Tobias